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Relevant links

  • GROMACS web site

  • David van der Spoel web site

  • Temperature generator for REMD simulations

  • Software and utilities from the group.

  • Antechamber and GAFF website

  • Jorgensen group website (OPLS/AA)

  • Charmm generalized force field website

  • GROMOS Automated Topology Builder (ATB) and Repository

  • MemBuilder: Automated lipid membrane builder supporting asymmetric bilayers